Microsatellite DNA analysis of coastal populations of bull trout (Salvelinus confluentus) in British Columbia: zoogeographic implications and its application to recreational fishery management

Microsatellite DNA variation was assayed among 383 bull trout (Salvelinus confluentus) from 20 Pacific coastal localities from the Skeena River (central British Columbia) to the Olympic Peninsula (western Washington State). An average of 1.7 alleles was resolved per population and heterozygosity averaged 0.35. Twenty-six fish were identified as bull trout × Dolly Varden (Salvelinus malma) hybrids. Population subdivision was substantial (θ = 0.33), but subdivision was higher (θ = 0.46) when interior populations (N = 37) were included, indicating a major genetic distinction between “coastal” and “interior” bull trout. Bull trout populations north of the Squamish River were genetically more similar to interior bull trout than to other more southern coastal populations, suggesting that they had been founded by headwater transfers from interior populations. Individual assignment of bull trout averaged 53.4% correct assignment among populations (range: 12%–95%). Mixture analysis indicated that most fish from the lower Fraser River recreational fishery originated from major nearby tributaries (e.g., Pitt, upper Lillooet, and Chilliwack rivers). Our results substantiate the existence of two major evolutionary lineages of bull trout and highlight the importance of tributary habitats for the persistence of local populations, as well as for those that forage in downstream areas on the